BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004A04LP1|AL425210
(1010 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1118 1859 0.0
>3x_Contig1118
Length = 5540
Score = 1859 bits (937), Expect = 0.0
Identities = 998/1012 (98%), Gaps = 6/1012 (0%)
Strand = Plus / Plus
Query: 1 gatctagaagatattttacaacatttatgtggccattc-gcggaag-atcaataagaggc 58
|||||||||||| ||||| || ||||||||||| ||| ||||||| |||||||||||||
Sbjct: 387 gatctagaagatgttttagaagatttatgtggcgattgtgcggaagcatcaataagaggc 446
Query: 59 gtatctagaaacatatcatatgattgaatattaacattagctccatttcttacgagcaac 118
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 447 gtatctagaaacatatcatatgattgaatattaacattagctccatgtcttacgagcaac 506
Query: 119 tcgacaattgctgaatgac-catttagagctgcttcgtgtagtggcgtatttccagcgtt 177
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tcgacaattgctgaatgacgcatttagagctgcttcgtgtagtggcgtatttccagcgtt 566
Query: 178 gtcttggtcgttaacgtcatagccgtcttcttcaataagtttttttgccaaatcatattt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtcttggtcgttaacgtcatagccgtcttcttcaataagtttttttgccaaatcatattt 626
Query: 238 gcctttatcacaagcaatttgtagttttgtcctgcctccggcatccctatgtactccacg 297
|||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 627 gcctttattacaagcaatttgtagttttgttc--cctccggcatccctatgtactccacg 684
Query: 298 cttagtcttcggtatctttttcccggcagaatgtttttgcttcttgtgattggaggagtt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttagtcttcggtatctttttcccggcagaatgtttttgcttcttgtgattggaggagtt 744
Query: 358 ttctatactagaggatttgcgcttgtgttcattataatgtttcaccggagaggaatcttc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttctatactagaggatttgcgcttgtgttcattataatgtttcaccggagaggaatcttc 804
Query: 418 gtgaatcgcactgcttgatattttagctgtacgagcctcatctaaatcggaaagatcaga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgaatcgcactgcttgatattttagctgtacgagcctcatctaaatcggaaagatcaga 864
Query: 478 atcggattccccatcatttgtcaatactggagcacttgattgtcgactgttgtttccgct 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 atcggattccccatcatttgtcaatactggagcacttgattgtcgactgttgtttccgct 924
Query: 538 ttcaagttgatcacctcgtattagtctccccatttttggtcttggtggcgatgcaggctc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ttcaagttgatcacctcgtattagtctccccatttttggtcttggtggcgatgcaggctc 984
Query: 598 tgtcggtgcgtcactttcaacttcactgagtgcactactatattcttcgtcagaatgctt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 tgtcggtgcgtcactttcaacttcactgagtgcactactatattcttcgtcagaatgctt 1044
Query: 658 atttctccctactttcggtagatttttcttttcttctacatccgtttcctgttttatttc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 atttctccctactttcggtagatttttcttttcttctacatccgtttcctgttttatttc 1104
Query: 718 attaataggtcctttcgtttccgcttgtctcaccggtattgactcttgattattcaaagg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 attaataggtcctttcgtttccgcttgtctcaccggtattgactcttgattattcaaagg 1164
Query: 778 agat-caactttctggtcagagctgtttgcttggctaacgacatagggttcgtctgatgg 836
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 agatccaactttctggtcagagctgtttgcttggctaacgacatagggttcgtctgatgg 1224
Query: 837 ttgttttgtactgttctgatcagttgaagttaccttttgagatacctcttcctcctttac 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 ttgttttgtactgttctgatcagttgaagttaccttttgagatacctcttcctcctttac 1284
Query: 897 tggaacattggtaacagaataattcccattttcacccactggcttaggactttctcgctg 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 tggaacattggtaacagaataattcccattttcacccactggcttaggactttctcgctg 1344
Query: 957 ctgttgctctgatctttctcgttcttctcttctctcttcgagacgagataga 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1345 ctgttgctctgatctttctcgttcttctcttctctcttcgagacgagataga 1396
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7609
Number of Sequences: 1807
Number of extensions: 7609
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 1010
length of database: 10,358,551
effective HSP length: 16
effective length of query: 994
effective length of database: 10,329,639
effective search space: 10267661166
effective search space used: 10267661166
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)